1. Casey Dunn
  2. mnemiopsis_trees_2014

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Casey Dunn  committed 4b0c971

summarized reduced holozoa results

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 - The rooting of genome analyses is sensitive to both model selection (cat vs. cat+gtr) and outgroup selection. The novel Ctenophora+Porifera clade obtained in some cat and cat+gtr analyses of the genome matrices is strongly rejected by the gene content data, according to the SOWH test.
 
-- Analyses of a reduced taxon Opisthokonta EST matrix do converge under the cat model. This analysis, like the non-convergent cat+gtr analyses of the full EST matrices, place Ctenophora as the sister group to all other animals.
+- Analyses of a reduced taxon Opisthokonta EST matrix do converge under the cat model. This analysis, like the non-convergent cat+gtr analyses of the full EST matrices, place Ctenophora as the sister group to all other animals. This result is sensitive to outgroup sampling, and the equivalent Holozoa matrix places Porifera as the sister group to all other animals.
 
 
 ## Results
 
 #### Holozoa
 
-Analysis still running.
+![Holozoa cat reduced EST tree](https://bytebucket.org/caseywdunn/mnemiopsis_trees_2014/raw/master/est_reduced_pb_cat/holozoa_s_cat_04Mar2014/bpcomp.con.svg)
+
+This analysis did converge (maxdiff=0.0957494). It places Porifera as the sister group to all other animals with a posterior probability of 97%.
 
 #### Opisthokonta