FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:02:15 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:08:16 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:17:06 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 10:23:35 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Fri Jul 6 11:01:37 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:15 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 19:01:51 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:04:54 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 20:58:28 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:10:40 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 21:43:28 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:00:03 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:06:39 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Sun Jul 8 22:54:00 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:36:33 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:39:00 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 13:48:59 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% BOWTIE1 :: File:Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq Warning: Could not find any reads in "Examples/basic_examples/miRNAs/Known_miRNAs/results//cutadapt_results/SRR873382_cut.fastq" # reads processed: 0 # reads with at least one reported alignment: 0 (0.00%) # reads that failed to align: 0 (0.00%) No alignments FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:05:37 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873382_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873383_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873384_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873385_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 43% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873386_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873387_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873388_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% FASTQCSTATS :: [Mon Jul 9 14:40:53 2018] Name SRR873389_fastqc Total Sequences: 500000 Sequence length: 37 Encoding: Sanger / Illumina 1.9 GCcontent: 44% Traceback (most recent call last): File "./bin/Linux/cutadapt//cut_adapt", line 9, in from cutadapt.scripts import cutadapt File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/scripts/cutadapt.py", line 74, in from cutadapt.adapters import Adapter, ColorspaceAdapter, BACK, FRONT, PREFIX, ANYWHERE File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/adapters.py", line 4, in from cutadapt import align, colorspace File "/home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/align.py", line 225, in from cutadapt.calign import globalalign_locate ImportError: /home/leila/apps/miARma/cbbio-miarma-42e187a7f514/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type