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  3. miARma

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Issues (51–75 of 128)

Title T P Status Votes Assignee Created Updated Actions
#77: Problem running the EdgeR analysis on miARma
bug major closed
CBBIO
#79: Use miARmaSeq for only DE analysis and target prediction
task major closed
#89: Functional analysis error
bug major closed
#92: how to load my sequnces
task major resolved
#94: QC_EdgeR read.table() error with check.names=TRUE
proposal major resolved
#95: QC_EdgeR() boxplot of normalized counts
proposal major new
#96: Checking Aligner-bowtie1index parameter ... error!
bug major resolved
#91: test
bug major closed
#85: Permisson denied when trying to remove files from within the container
task major resolved
CBBIO
#87: Using script in config files
enhancement major resolved
#82: Quantification question
bug major resolved
#86: Understanding miRGate scoring
proposal major resolved
#84: Understanding miARma-seq plot
bug major resolved
#80: Error running DeNovo
bug major resolved
#81: How to get unaligned reads with bowtie for each entry files
proposal major resolved
#78: miRNA analysis on EST sequences using miARMASeq
bug major resolved
#74: Target Prediction Module - Empty result files in miRGate_results
bug major resolved
#72: miARma/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type
bug major resolved
#69: 501 Protocol scheme 'http' is not supported
bug major resolved
#62: miARma run issuse
bug major resolved
#64: Novel miRNA target prediction
task major resolved
#51: converting read counts to rpkm
proposal major resolved
#65: how to run miARmaSeq with bam file
proposal major resolved
#66: EdgeR output for miRNA analysis
bug major resolved
CBBIO
#68: known miRNA pipeline using edgeR for DE
bug major resolved
CBBIO
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