1. cistrome
  2. Cistrome-Harvard

Source

Cistrome-Harvard / test-data / lca_output3.taxonomy

The branch 'meme_requirement_on_fimo' does not exist.
IA_1-104173	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-135979	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-139090	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-144417	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604077
IA_1-144996	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-160446	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-161439	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-190855	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-205154	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-216231	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-236286	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-237681	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-250166	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-254274	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-270826	591020	root	Bacteria	n	n	n	Proteobacteria	n	n	Gammaproteobacteria	n	n	Enterobacteriales	n	n	Enterobacteriaceae	n	n	n	Shigella	n	Shigella flexneri	n	281604070
IA_1-27817	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604153
IA_1-278966	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604077
IA_1-285361	591020	root	Bacteria	n	n	n	Proteobacteria	n	n	Gammaproteobacteria	n	n	Enterobacteriales	n	n	Enterobacteriaceae	n	n	n	Shigella	n	Shigella flexneri	n	281604070
IA_1-29000	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-291427	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-293054	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-296315	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-310974	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-311282	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-314709	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604077
IA_1-324951	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604077
IA_1-42600	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-45102	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-48105	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-57254	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-61975	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-66943	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-68288	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-79371	591020	root	Bacteria	n	n	n	Proteobacteria	n	n	Gammaproteobacteria	n	n	Enterobacteriales	n	n	Enterobacteriaceae	n	n	n	Shigella	n	Shigella flexneri	n	281604065
IA_1-82334	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-84488	591020	root	Bacteria	n	n	n	Proteobacteria	n	n	Gammaproteobacteria	n	n	Enterobacteriales	n	n	Enterobacteriaceae	n	n	n	Shigella	n	Shigella flexneri	n	281604065
IA_1-93958	591020	root	Bacteria	n	n	n	Proteobacteria	n	n	Gammaproteobacteria	n	n	Enterobacteriales	n	n	Enterobacteriaceae	n	n	n	Shigella	n	Shigella flexneri	n	281604070
IA_1-95255	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604181
IA_1-95526	10116	root	Eukaryota	Metazoa	n	n	Chordata	Craniata	Gnathostomata	Mammalia	n	Euarchontoglires	Rodentia	Sciurognathi	n	Muridae	Murinae	n	n	Rattus	n	Rattus norvegicus	n	281604186
IA_1-99821	591020	root	Bacteria	n	n	n	Proteobacteria	n	n	Gammaproteobacteria	n	n	Enterobacteriales	n	n	Enterobacteriaceae	n	n	n	Shigella	n	Shigella flexneri	n	281604070