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galaxy-obo / lib / galaxy / datatypes / converters / encodepeak_to_bgzip_converter.xml

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<tool id="CONVERTER_encodepeak_to_bgzip_0" name="Convert ENCODEPeak to BGZIP" version="1.0.0" hidden="true">
<!--  <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> -->
  <command interpreter="python">bgzip.py 
                                  -c ${input1.metadata.chromCol} 
                                  -s ${input1.metadata.startCol} 
                                  -e ${input1.metadata.endCol} 
                                  $input1 $output1
  </command>
  <inputs>
    <page>
        <param format="ENCODEPeak" name="input1" type="data" label="Choose ENCODEPeak file"/>
    </page>
   </inputs>
  <outputs>
    <data format="bgzip" name="output1"/>
  </outputs>
  <help>
  </help>
</tool>