comp_bio / iDiffIR — Bitbucket

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2017-02-23

http://combi.cs.colostate.edu/idiffir/

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Install

python setup.py build

python setup.py install

Note:

To install to a local set of python libraries use --home=/PATH/TO/LOCAL/LIBRARY

Required Packages

SciPy
Pysam
matplotlib
NumPy

Recent activity

1 commit

Pushed to comp_bio/idiffir

2877910 Added built-in version of SpliceGrapher

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

e068898 Added prefiltering option to MISO

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

a1dd98c Fixed setup.py problem

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

815a44e Added MISO analysis

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

192d1f8 Added plotting script for stand-alone visualization of differential splicing events.

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

069061b Added excised introns to miso gff generation

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

2e350c9 Changed hash for InferredIntrons in make_MISO_IR.py

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

83f301b Remove redundancy in MISO IR gff files.

Mike Hamilton ·

1 commit

Pushed to comp_bio/idiffir

8b04483 fixed error in Stat.py

Mike Hamilton ·

Proble running iDiffir

Issue #2 commented on in comp_bio/idiffir

Mike Hamilton ·

Proble running iDiffir

Issue #2 created in comp_bio/idiffir

Anonymous ·