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  2. 3DNETMOD
  3. lib5c

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Issues (1–15 of 15)

Title T P Status Votes Assignee Milestone Created Updated Actions
#80: simplify pipeline system
proposal trivial new
#74: [docs] explain how to augment a primermap with GC content and length information
proposal trivial new
#64: [docs] Installing from a tarball section on Install page is obsolete
bug trivial resolved
#63: [docs] PEP 8 link in Testing, building, and releasing docs page is incorrect
bug trivial resolved
#57: display of plotting output in tutorial notebooks is inconsistent
enhancement trivial closed
#53: lib5c.util.optimization.array_newton() is redundant with latest scipy versions
proposal trivial on hold
#45: support lognormal model fed by exp(mu) instead of mean of unlogged counts
proposal trivial new
#20: some Dataset.apply_*() functions don't work inplace
enhancement trivial new
#19: improvements to Dataset.select()
proposal trivial new
#17: reduce boilerplate re-use in toolbox
proposal trivial on hold
#16: reorganize toolkit to separate out plotters
proposal trivial resolved
#9: refactor plotters and writers to use check_outdir() consistently
proposal trivial closed
#8: expose expected model plotting as a command line tool
enhancement trivial on hold
#6: refactor pipeline visualizations to be more modular
proposal trivial open
#4: use different names for the parallelized versions of functions
proposal trivial wontfix