Commits

Giovanni Marco Dall'Olio committed f193bf2

ADD: job.sh script to launch all simulations

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Files changed (1)

+cd /home/gioby/workspace/cnag-simulations/bin/
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_26 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_26.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_26.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_79 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_79.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_79.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_15 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_15.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_15.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_59 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_59.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_59.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_78 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_78.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_78.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_19 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_19.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_19.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_56 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_56.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_56.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_42 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_42.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_42.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_82 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_82.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_82.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_33 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_33.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_33.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_6 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_6.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_6.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_3 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_3.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_3.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_44 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_44.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_44.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_40 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_40.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_40.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_36 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_36.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_36.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_85 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_85.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_85.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_2 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_2.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_2.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_50 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_50.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_50.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_46 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_46.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_46.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_47 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_47.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_47.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_67 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_67.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_67.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_39 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_39.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_39.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_43 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_43.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_43.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_54 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_54.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_54.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_60 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_60.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_60.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_55 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_55.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_55.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_21 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_21.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_21.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_63 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_63.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_63.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_66 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_66.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_66.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_87 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_87.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_87.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_18 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_18.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_18.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_88 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_88.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_88.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_11 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_11.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_11.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_24 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_24.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_24.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_86 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_86.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_86.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_61 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_61.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_61.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_5 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_5.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_5.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_53 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_53.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_53.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_13 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_13.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_13.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_41 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_41.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_41.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_69 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_69.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_69.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_10 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_10.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_10.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_76 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_76.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_76.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_25 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_25.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_25.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_14 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_14.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_14.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_57 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_57.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_57.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_68 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_68.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_68.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_58 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_58.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_58.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_83 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_83.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_83.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_48 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_48.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_48.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_81 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_81.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_81.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_51 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_51.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_51.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_29 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_29.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_29.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_9 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_9.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_9.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_31 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_31.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_31.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_35 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_35.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_35.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_77 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_77.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_77.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_75 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_75.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_75.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_72 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_72.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_72.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_4 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_4.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_4.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_34 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_34.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_34.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_23 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_23.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_23.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_84 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_84.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_84.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_45 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_45.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_45.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_52 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_52.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_52.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_28 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_28.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_28.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_49 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_49.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_49.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_27 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_27.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_27.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_32 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_32.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_32.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_74 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_74.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_74.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_16 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_16.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_16.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_20 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_20.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_20.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_89 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_89.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_89.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_90 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_90.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_90.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_22 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_22.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_22.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_38 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_38.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_38.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_30 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_30.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_30.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_17 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_17.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_17.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_71 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_71.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_71.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_73 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_73.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_73.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_8 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_8.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_8.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_80 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_80.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_80.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_70 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_70.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_70.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_62 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_62.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_62.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_64 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_64.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_64.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_7 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_7.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_7.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_65 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_65.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_65.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_37 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_37.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_37.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_1 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_1.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_1.ped
+rm out*
+rm cosi_60ind_*
+
+cp /home/gioby/workspace/cnag-simulations/params/selection_params_12 params
+perl run.pl /home/gioby/workspace/cnag-simulations/bin/params
+perl cosi_to_plink.pl
+cp cosi_60ind_EUR.map /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_12.map
+cp cosi_60ind_EUR.ped /home/gioby/workspace/cnag-simulations/results/plink_files/coalesc_simEUR_neutral_12.ped
+rm out*
+rm cosi_60ind_*