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Giovanni Marco Dall'Olio committed 4ebff8e

Results: search for ACT motifs in seq1

Done with EMBOSS 6.2.0

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File results/act_patterns

+########################################
+# Program: fuzznuc
+# Rundate: Tue  8 Feb 2011 23:16:07
+# Commandline: fuzznuc
+#    -sequence data/sequences.fasta
+#    -pattern act
+#    -outfile results/act_patterns
+# Report_format: seqtable
+# Report_file: results/act_patterns
+########################################
+
+#=======================================
+#
+# Sequence: seq1     from: 1   to: 141
+# HitCount: 3
+#
+# Pattern_name Mismatch Pattern
+# pattern             0 act
+# 
+# Complement: No
+#
+#=======================================
+
+  Start     End  Strand Pattern_name Mismatch Sequence
+     36      38       + pattern             . act
+     86      88       + pattern             . act
+    132     134       + pattern             . act
+
+#---------------------------------------
+#---------------------------------------
+
+#---------------------------------------
+# Total_sequences: 1
+# Total_length: 141
+# Reported_sequences: 1
+# Reported_hitcount: 3
+#---------------------------------------