davemason / Snippets

Author	Title	Updated
Dave Mason	Resaving a subset of images as OME TIFF files	2022-05-03
Dave Mason	Automate pairwise stitching. (Keep all dimensions multiples of 2 fields)	2022-02-28
Dave Mason	Calculate the average selection [https://forum.image.sc/t/finding-the-mean-outline-out-of-a-series-of-outlines/63709?u=dnmason]	2022-02-24
Dave Mason	Create Hamamatsu NDPI set files	2021-04-20
Dave Mason	Rearrange CSV file results IJ Forum [https://forum.image.sc/t/copying-entire-columns-into-new-files-fiji-macro/45182?u=dnmason]	2020-11-13
Dave Mason	Rename images based on titles [https://forum.image.sc/t/rename-multiple-images-based-on-their-present-titles/35987]	2020-04-06
Dave Mason	Calculating the radial thickness of an object. Image.sc forum [https://forum.image.sc/t/dividing-the-components-into-segments-and-measuring-the-wall-thicknesses/29943]	2019-09-30
Dave Mason	Recovering XY points from a tab delimited text file Image.sc forum (https://forum.image.sc/t/fiji-multi-point-tool-load-points-via-xy-coordinates/29674)	2019-09-20
Dave Mason	Example code to process all ROIs in ROI manager (https://forum.image.sc/t/help-to-update-imagej-code/27566)	2019-07-10
Dave Mason	IJ1 script to Numerically rename files (IJ forum: https://forum.image.sc/t/how-to-change-name-of-images-to-1-jpg-2-jpg-automatically/24101 )	2019-03-22
Dave Mason	IJ1 script to Numerically rename files with rename function (IJ forum: https://forum.image.sc/t/how-to-change-name-of-images-to-1-jpg-2-jpg-automatically/24101 )	2019-03-22
Dave Mason	IJ1 macro script to make brownian diffusing data	2019-03-20
Dave Mason	Example SQL query against a BookedScheduler DB (http://php.brickhost.com/forums/index.php?topic=16240.0)	2019-03-05
Dave Mason	Pulls Centroid from Oval selections and draws on as overlay (https://forum.image.sc/t/center-of-oval-selections/23315)	2019-02-27
Dave Mason	Synchronise all Fiji Windows	2019-02-27
Dave Mason	aenkBL: Untitled snippet	2019-02-27
Dave Mason	Create a temporary desktop folder in windows	2019-02-27
Dave Mason	Measurement of Ant Heads from AntWeb using a Fiji script	2019-02-25
Dave Mason	Quick intro to plotting in MATLAB	2019-02-13
Dave Mason	PostAcquisition: Create data for blog post about pivot tables	2019-01-31
Dave Mason	Count thresholded pixels (https://forum.image.sc/t/macro-for-batch-saving-of-histogram-results/20153)	2019-01-18
Dave Mason	Iterate through a folder of image sequences, process and resave (https://forum.image.sc/t/batch-convert-series-of-tiff-images/22123)	2019-01-16
Dave Mason	Get profiles along Feret lengths (https://forum.image.sc/t/drawing-feret-and-feretmin-as-selection/22131)	2019-01-15
Dave Mason	Analysis of Aorta Images from Ilastik Masks (See Chim et al. "Micromechanical and structural properties of elastin to predict the aetiology of ascending aortic aneurysm" for details)	2018-09-18
Dave Mason	Create Brownian Diffusion data for tracking practise and teaching	2018-08-28
Dave Mason	Calculate the on time and off time for protein recruitment (for Thesis of Sophie Cowman)	2018-07-23
Dave Mason	Measure parameters from an Ilastik "Simple Segmentation" Output	2018-07-06
Dave Mason	Make a duplicate offset line [http://forum.imagej.net/t/how-to-draw-a-curved-line-in-imagej-and-move-it-for-certain-pixels-can-i-also-make-a-selection-of-the-area-in-between-the-two-lines/11793]	2018-07-02
Dave Mason	Image Feature Measurement from http://forum.imagej.net/t/image-features-measurement-in-batch-mode-not-working/11284	2018-06-14
Dave Mason	Make a moving 2d background (http://forum.imagej.net/t/generating-synthetic-data-2d-surface/11318)	2018-06-08