Forward-in-time simulation of Recombination, Quantitative traits, and Selection
forqs is a forward-in-time population genetics simulation that tracks
individual haplotype chunks as they recombine each generation.
also models quantitative traits and selection on those traits.
forqs is implemented as a command-line C++ program, using a modular design
that gives the user great flexibility in creating custom simulations. It is
freely available with a permissive BSD license. You can obtain the latest
binary package (Linux, OSX, Windows) from the downloads
A manuscript describing
forqs has been published in Bioinformatics and is
available online (Open Access).
forqs(the main program)
forqs_map_ms(tool for mapping
mscoalescent output to
forqs_module_reference.html(HTML reference for module parameters)
tutorial_*.txt(tutorials referenced in
Output files will be created in
Created by Darren Kessner with John Novembre at UCLA.
Copyright (c) 2013 Regents of the University of California
This software makes use of the Boost C++ libraries
The software also uses the muparser library for parsing mathematical expressions.