forqs module reference
Forward simulation of Recombination, Quantitative traits, and Selection
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forqs module reference Documentation

forqs is a forward-in-time simulator of recombination, quantitative traits, and selection.

This documentation provides details on the user-configurable modules available in forqs, including the parameters used to configure each module.

The simulator tracks individual haplotype chunks through a Wright-Fisher simulation with recombination and selection. Individual quantitative trait values are calculated from genotypes, and fitnesses are in turn calculated from quantitative trait values.

The simulation has a modular architecture to allow the user to specify (in SimulatorConfig):

In order to keep this module reference in sync with the software, this documentation is generated automatically from the forqs source code (using Doxygen).