hmmer janelia link broken.

[Daniel Morais]

can't connect

ftp://selab.janelia.org/pub/software/hmmer3/3.1b1/hmmer-3.1b1-linux-intel-x86_64.tar.gz (tentativa: 3) => “hmmer-3.1b ftp://selab.janelia.org/pub/software/hmmer3/3.1b1/hmmer-3.1b1-linux-intel-x86_64.tar.gz (tentativa: 3) => “hmmer-3.1b1-linux-intel-x86_64.tar.gz” Conectando-se a selab.janelia.org (selab.janelia.org)|206.241.0.22|:21...1-linux-intel-x86_64.tar.gz” Conectando-se a selab.janelia.org (selab.janelia.org)|206.241.0.22|:21...

[Manas Bhatnagar]

You may run the following commands from your metannotate directory to install hmmsearch manually. I am hosting the file and I got it from here: http://hmmer.org/download.html#archive

  software=`pwd`/software
  wget "https://friends.manas.ca/.metannotate/hmmer-3.1b1.tar.gz"
  tar -xzf hmmer-3.1b1.tar.gz
  cd hmmer*
  ./configure
  make
  cp -R . "$software"/hmmer/
  ln -s "$software"/hmmer/binaries/hmmstat ~/.local/bin/hmmstat
  ln -s "$software"/hmmer/binaries/hmmsearch ~/.local/bin/hmmsearch
  ln -s "$software"/hmmer/binaries/hmmalign ~/.local/bin/hmmalign
  ln -s "$software"/hmmer/binaries/esl-reformat ~/.local/bin/esl-reformat
  ln -s "$software"/hmmer/binaries/esl-sfetch ~/.local/bin/esl-sfetch

Upon which, you may run the install script again.