Usage of appendix in both UsersGuide and ReferenceManual

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Issue #918 closed
Frank Löffler created an issue

The usage of the appendix of the UsersGuide inside the ReferenceManual led to a lot of internal references being commented out. This probably happened when UsersGuide and ReferenceManual had been divided, but it means that currently a lot of useful information is missing. In #885 there is agreement that the best solution would be to have the appendix included only by one of the two documents, and to restore references as much as possible.

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