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HDF5 files reading error

Issue #151 resolved
Rajeev Jain created an issue

On Ubuntu 20.04, gcc9.2

Error looks very similar to the one in Issue 107: https://bitbucket.org/fathomteam/moab/issues/107/segmentation-fault-when-reading-hdf5-file

These 5 tests fail:

FAIL: scdpart
FAIL: read_nc_par
FAIL: ucdtrvpart
FAIL: mpastrvpart
FAIL: write_nc_par

Mostly pointing to: [0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp [0]MOAB ERROR: NULL file handle.! see detailed error below:

jain@jain:~/projects/buildmoab_gcc92/test/parallel$ ./read_nc_par 
Running test_read_eul_all ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/eul3x48x96.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 84 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_eul_all: FAILED
Running test_read_eul_onevar ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/eul3x48x96.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 111 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_eul_onevar: FAILED
Running test_read_eul_onetimestep ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/eul3x48x96.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 194 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_eul_onetimestep: FAILED
Running test_read_eul_nomesh ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/eul3x48x96.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 217 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_eul_nomesh: FAILED
Running test_read_eul_novars ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/eul3x48x96.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 247 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_eul_novars: FAILED
Running test_read_domain ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/domain.ocn.ne4np4_oQU240.160614.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 510 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_domain: FAILED
Running test_read_fv_onevar ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/fv3x46x72.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 300 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_fv_onevar: FAILED
Running test_read_fv_onetimestep ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/fv3x46x72.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 383 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_fv_onetimestep: FAILED
Running test_read_fv_nomesh ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/fv3x46x72.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 414 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_fv_nomesh: FAILED
Running test_read_fv_novars ...
  0  H5M H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS is not defined
  0  H5M (0.00 s) Getting file summary
  0  H5M (0.00 s) Communicating file summary
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/fv3x46x72.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 444 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_fv_novars: FAILED
Running test_read_fv_ghosting ...
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: NULL file handle.!
[0]MOAB ERROR: is_error() line 125 in src/io/ReadHDF5.hpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for IDEAS!
[0]MOAB ERROR: load_file() line 40 in src/io/ReadIDEAS.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for meshtal!
[0]MOAB ERROR: load_file() line 75 in src/io/ReadMCNP5.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for NASTRAN!
[0]MOAB ERROR: load_file() line 74 in src/io/ReadNASTRAN.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for ABAQUS data!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadABAQUS.cpp
Subset reading not supported for RTT meshes
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 194 in src/io/ReadVtk.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for OBJ.!
[0]MOAB ERROR: load_file() line 126 in src/io/ReadOBJ.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for Sms!
[0]MOAB ERROR: load_file() line 80 in src/io/ReadSms.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for CUB files!
[0]MOAB ERROR: load_file() line 305 in src/io/Tqdcfr.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for VTK!
[0]MOAB ERROR: load_file() line 122 in src/io/ReadSmf.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Parsing error at line 1: expected one of { $NOD $MeshFormat } got "CDF"!
[0]MOAB ERROR: match_token() line 367 in src/io/FileTokenizer.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for STL!
[0]MOAB ERROR: load_file() line 73 in src/io/ReadSTL.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Reading subset of files not supported for TetGen!
[0]MOAB ERROR: load_file() line 71 in src/io/ReadTetGen.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: /home/jain/projects/buildmoab_gcc92/../moab/MeshFiles/unittest/io/fv3x46x72.t.3.nc: Trouble reading vertices!
[0]MOAB ERROR: read_vertices() line 131 in src/io/ReadTemplate.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed to load file after trying all possible readers!
[0]MOAB ERROR: serial_load_file() line 578 in src/Core.cpp
[0]MOAB ERROR: --------------------- Error Message ------------------------------------
[0]MOAB ERROR: Failed in step PARALLEL READ PART!
[0]MOAB ERROR: load_file() line 585 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 252 in src/ReadParallel.cpp
[0]MOAB ERROR: load_file() line 453 in src/Core.cpp
ErrorCode Test Failed: MB_SUCCESS == rval
  at line 485 of '../../../moab/test/parallel/../io/read_nc.cpp'
  Expected value: Success (0)
  Actual value:   Failure (16)

  test_read_fv_ghosting: FAILED

‌

Comments (7)

  3. Vijay M

    Can you verify if you HDF5 and NetCDF installations are parallel enabled ? Also, attach MOAB config.log

  5. Rajeev Jain reporter
    jain @ jain ~/projects/buildmoab_gcc92/test/parallel

    └─ $ ▶ ldd read_nc_par |grep hdf
    libhdf5_hl.so.100 => /home/jain/.spack/Spack/opt/spack/linux-ubuntu20.04-skylake/gcc-9.2.0/hdf5-1.10.7-43w22plx2xpgchr56rs55ynszznbrtbw//lib/libhdf5_hl.so.100 (0x00007f49f0d4f000)
    libhdf5.so.103 => /home/jain/.spack/Spack/opt/spack/linux-ubuntu20.04-skylake/gcc-9.2.0/hdf5-1.10.7-43w22plx2xpgchr56rs55ynszznbrtbw//lib/libhdf5.so.103 (0x00007f49f0995000)

    jain @ jain ~/projects/buildmoab_gcc92/test/parallel
    └─ $ ▶ ldd read_nc_par |grep net
    libpnetcdf.so.4 => /home/jain/.spack/Spack/opt/spack/linux-ubuntu20.04-skylake/gcc-9.2.0/parallel-netcdf-1.12.2-cfrxwz72bcygsjss2er557dwori5g6lg//lib/libpnetcdf.so.4 (0x00007fd4272d2000)

    ‌

    hdf5 uses openmpi@4.1.1

    ‌

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