Commits

Flávio Coelho committed c99c891

fixec the import uri in the epidemic models ontology

Comments (0)

Files changed (3)

EpidemicModeling/EpidemicModeling.owl

      xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
      xmlns:xml="http://www.w3.org/XML/1998/namespace"
      ontologyIRI="https://bitbucket.org/fccoelho/math-model-ontology/raw/795d675c89cd/EpidemicModeling/EpidemicModeling.owl">
+    <Prefix name="xsd" IRI="http://www.w3.org/2001/XMLSchema#"/>
+    <Prefix name="owl" IRI="http://www.w3.org/2002/07/owl#"/>
     <Prefix name="" IRI="http://www.w3.org/2002/07/owl#"/>
-    <Prefix name="owl" IRI="http://www.w3.org/2002/07/owl#"/>
     <Prefix name="rdf" IRI="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
-    <Prefix name="xsd" IRI="http://www.w3.org/2001/XMLSchema#"/>
     <Prefix name="rdfs" IRI="http://www.w3.org/2000/01/rdf-schema#"/>
     <Import>https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl</Import>
     <Annotation>
     </Annotation>
     <Annotation>
         <AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/>
-        <Literal datatypeIRI="&xsd;string">Cláudia Torres Codeço</Literal>
+        <Literal datatypeIRI="&xsd;string">Renato Rocha Souza</Literal>
     </Annotation>
     <Annotation>
         <AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/>
-        <Literal datatypeIRI="&xsd;string">Renato Rocha Souza</Literal>
+        <Literal datatypeIRI="&xsd;string">Cláudia Torres Codeço</Literal>
     </Annotation>
     <Annotation>
         <AnnotationProperty IRI="http://purl.org/dc/elements/1.1/language"/>
     </EquivalentClasses>
     <SubClassOf>
         <Class IRI="http://www.co-ode.org/ontologies/ont.owl#Modelling_Domain"/>
-        <Class abbreviatedIRI="owl:Thing"/>
+        <Class abbreviatedIRI=":Thing"/>
     </SubClassOf>
     <SubClassOf>
         <Class IRI="http://www.semanticweb.org/ontologies/2011/4/MathModels.owl#Epidemic_Model"/>
 
 
 
-<!-- Generated by the OWL API (version 3.2.5.1928) http://owlapi.sourceforge.net -->
+<!-- Generated by the OWL API (version 3.2.5.1912) http://owlapi.sourceforge.net -->
 

EpidemicModeling/catalog-v001.xml

 <?xml version="1.0" encoding="UTF-8" standalone="no"?>
 <catalog prefer="public" xmlns="urn:oasis:names:tc:entity:xmlns:xml:catalog">
+    <uri id="Imports Wizard Entry" name="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl" uri="https://bitbucket.org/fccoelho/math-model-ontology/raw/tip/Modeling%20Ontology/MathModels.owl"/>
     <uri id="Imports Wizard Entry" name="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl" uri="file:/home/fccoelho/Documents/Projects_software/math-model-ontology/Modeling%20Ontology/MathModels.owl"/>
     <uri id="User Entered Import Resolution" name="http://www.semanticweb.org/ontologies/2011/4/MathModels.owl" uri="file:/home/fccoelho/Documentos/Projetos/math-model-ontology/Modeling%20Ontology/MathModels.owl"/>
     <group id="Folder Repository, directory=, recursive=true, Auto-Update=true, version=2" prefer="public" xml:base="">

Modeling Ontology/MathModels.owl

      xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
      xmlns:ace_lexicon="http://attempto.ifi.uzh.ch/ace_lexicon#">
-    <owl:Ontology rdf:about="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl">
+    <owl:Ontology rdf:about="https://bitbucket.org/fccoelho/math-model-ontology/raw/tip/Modeling%20Ontology/MathModels.owl">
         <dc:creator rdf:datatype="&xsd;string">Claudia Torres Codeco</dc:creator>
         <dc:creator rdf:datatype="&xsd;string">Flavio Codeço Coelho</dc:creator>
         <dc:title rdf:datatype="&xsd;string">Mathematical Model Ontology</dc:title>
     </owl:AnnotationProperty>
     <owl:AnnotationProperty rdf:about="&ace_lexicon;TV_pl"/>
     <owl:AnnotationProperty rdf:about="&ace_lexicon;CN_pl"/>
-    <owl:AnnotationProperty rdf:about="&dc;description">
+    <owl:AnnotationProperty rdf:about="&dc;coverage">
         <rdfs:isDefinedBy rdf:resource="http://purl.org/dc/elements/1.1/"/>
     </owl:AnnotationProperty>
-    <owl:AnnotationProperty rdf:about="&dc;coverage">
+    <owl:AnnotationProperty rdf:about="&dc;description">
         <rdfs:isDefinedBy rdf:resource="http://purl.org/dc/elements/1.1/"/>
     </owl:AnnotationProperty>
     <owl:AnnotationProperty rdf:about="&rdfs;comment"/>
         <obo:IAO_0000114 rdf:resource="&obo;IAO_0000125"/>
     </rdf:Description>
     <owl:AnnotationProperty rdf:about="&ace_lexicon;TV_sg"/>
+    <owl:AnnotationProperty rdf:about="&ace_lexicon;CN_sg"/>
     <owl:AnnotationProperty rdf:about="&obo;IAO_0000118">
         <obo:IAO_0000114 rdf:resource="&obo;IAO_0000125"/>
     </owl:AnnotationProperty>
-    <owl:AnnotationProperty rdf:about="&ace_lexicon;CN_sg"/>
+    <owl:AnnotationProperty rdf:about="&ace_lexicon;TV_vbg"/>
     <owl:AnnotationProperty rdf:about="&dc;title">
         <rdfs:isDefinedBy rdf:resource="http://purl.org/dc/elements/1.1/"/>
     </owl:AnnotationProperty>
-    <owl:AnnotationProperty rdf:about="&ace_lexicon;TV_vbg"/>
     
 
 
     <owl:Class rdf:about="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#Variable">
         <rdfs:subClassOf>
             <owl:Restriction>
+                <owl:onProperty rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#hasRandomness"/>
+                <owl:someValuesFrom rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#Randomness_Partition"/>
+            </owl:Restriction>
+        </rdfs:subClassOf>
+        <rdfs:subClassOf>
+            <owl:Restriction>
                 <owl:onProperty rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#hasContinuity"/>
                 <owl:someValuesFrom rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#Continuity_Partition"/>
             </owl:Restriction>
                 <owl:someValuesFrom rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#Number_Domain"/>
             </owl:Restriction>
         </rdfs:subClassOf>
-        <rdfs:subClassOf>
-            <owl:Restriction>
-                <owl:onProperty rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#hasRandomness"/>
-                <owl:someValuesFrom rdf:resource="https://bitbucket.org/fccoelho/math-model-ontology/raw/2973f8304c08/Modeling%20Ontology/MathModels.owl#Randomness_Partition"/>
-            </owl:Restriction>
-        </rdfs:subClassOf>
         <rdfs:comment rdf:datatype="&xsd;string">A variable is typically a componet of a model which not known a priori, being commonly defined as a function of parameters and other variables</rdfs:comment>
         <ace_lexicon:CN_sg>Variable</ace_lexicon:CN_sg>
         <ace_lexicon:CN_pl>Variables</ace_lexicon:CN_pl>
         </oboInOwl:hasDefinition>
     </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/OBO_REL#realizes">
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasRelatedSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasRelatedSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasRelatedSynonym>
             <rdf:Description/>
         </oboInOwl:hasRelatedSynonym>
         <oboInOwl:hasExactSynonym>
             <rdf:Description/>
         </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasRelatedSynonym>
             <rdf:Description/>
         </oboInOwl:hasRelatedSynonym>
+        <oboInOwl:hasRelatedSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasRelatedSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasDefinition>
             <rdf:Description>
                 <oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>
             <rdf:Description/>
         </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasDefinition>
             <rdf:Description>
                 <oboInOwl:hasDbXref>
                 </oboInOwl:hasDbXref>
             </rdf:Description>
         </oboInOwl:hasDefinition>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasDefinition>
             <rdf:Description>
                 <oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>
             <rdf:Description/>
         </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+    </rdf:Description>
+    <rdf:Description rdf:about="&obo;OGMS_0000063">
+        <obo:IAO_0000412 rdf:resource="&obo;ogms.owl"/>
     </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/OBO_REL#inheres_in">
         <oboInOwl:hasExactSynonym>
             </rdf:Description>
         </oboInOwl:hasDefinition>
     </rdf:Description>
-    <rdf:Description rdf:about="&obo;OGMS_0000063">
-        <obo:IAO_0000412 rdf:resource="&obo;ogms.owl"/>
-    </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/CL#CL_0000000">
         <obo:IAO_0000412 rdf:resource="http://purl.org/obo/owl/CL"/>
     </rdf:Description>
         </oboInOwl:hasDefinition>
     </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/OBO_REL#realized_by">
-        <oboInOwl:hasDefinition>
-            <rdf:Description>
-                <oboInOwl:hasDbXref>
-                    <rdf:Description/>
-                </oboInOwl:hasDbXref>
-            </rdf:Description>
-        </oboInOwl:hasDefinition>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasExactSynonym>
             <rdf:Description/>
         </oboInOwl:hasExactSynonym>
                 </oboInOwl:hasDbXref>
             </rdf:Description>
         </oboInOwl:hasDefinition>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasRelatedSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasRelatedSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasDefinition>
+            <rdf:Description>
+                <oboInOwl:hasDbXref>
+                    <rdf:Description/>
+                </oboInOwl:hasDbXref>
+            </rdf:Description>
+        </oboInOwl:hasDefinition>
         <oboInOwl:hasRelatedSynonym>
             <rdf:Description/>
         </oboInOwl:hasRelatedSynonym>
                 </oboInOwl:hasDbXref>
             </rdf:Description>
         </oboInOwl:hasDefinition>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasRelatedSynonym>
             <rdf:Description/>
         </oboInOwl:hasRelatedSynonym>
         <oboInOwl:hasRelatedSynonym>
             <rdf:Description/>
         </oboInOwl:hasRelatedSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasRelatedSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasRelatedSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
     </rdf:Description>
     <rdf:Description rdf:about="&obo;OGMS_0000020">
         <obo:IAO_0000412 rdf:resource="&obo;ogms.owl"/>
         <rdfs:isDefinedBy rdf:resource="http://purl.org/dc/elements/1.1/"/>
     </rdf:Description>
     <rdf:Description rdf:about="http://www.obofoundry.org/ro/ro.owl#derives_from">
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasDefinition>
             <rdf:Description>
                 <oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>
             <rdf:Description/>
         </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
         <oboInOwl:hasDefinition>
             <rdf:Description>
                 <oboInOwl:hasDbXref>
         <obo:IAO_0000412 rdf:resource="http://purl.org/obo/owl/GO"/>
     </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/OBO_REL#results_in_formation_of">
-        <oboInOwl:hasExactSynonym>
-            <rdf:Description/>
-        </oboInOwl:hasExactSynonym>
+        <oboInOwl:hasDefinition>
+            <rdf:Description>
+                <oboInOwl:hasDbXref>
+                    <rdf:Description/>
+                </oboInOwl:hasDbXref>
+            </rdf:Description>
+        </oboInOwl:hasDefinition>
         <oboInOwl:hasDefinition>
             <rdf:Description>
                 <oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>
             <rdf:Description/>
         </oboInOwl:hasExactSynonym>
-        <oboInOwl:hasDefinition>
-            <rdf:Description>
-                <oboInOwl:hasDbXref>
-                    <rdf:Description/>
-                </oboInOwl:hasDbXref>
-            </rdf:Description>
-        </oboInOwl:hasDefinition>
+        <oboInOwl:hasExactSynonym>
+            <rdf:Description/>
+        </oboInOwl:hasExactSynonym>
     </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/GO#GO_0085031">
         <obo:IAO_0000412 rdf:resource="http://purl.org/obo/owl/GO"/>
             </rdf:Description>
         </oboInOwl:hasDefinition>
     </rdf:Description>
+    <rdf:Description rdf:about="&obo;IAO_0000078">
+        <obo:IAO_0000114 rdf:resource="&obo;IAO_0000125"/>
+    </rdf:Description>
     <rdf:Description rdf:about="http://www.obofoundry.org/ro/ro.owl#adjacent_to">
         <oboInOwl:hasDefinition>
             <rdf:Description>
             </rdf:Description>
         </oboInOwl:hasDefinition>
     </rdf:Description>
-    <rdf:Description rdf:about="&obo;IAO_0000078">
-        <obo:IAO_0000114 rdf:resource="&obo;IAO_0000125"/>
-    </rdf:Description>
     <rdf:Description rdf:about="http://purl.org/obo/owl/CHEBI#CHEBI_23367">
         <obo:IAO_0000412 rdf:resource="http://purl.org/obo/owl/CHEBI"/>
     </rdf:Description>
 
 
 
-<!-- Generated by the OWL API (version 3.2.5.1928) http://owlapi.sourceforge.net -->
+<!-- Generated by the OWL API (version 3.2.5.1912) http://owlapi.sourceforge.net -->