Import fenics causes MUMPS errors in other packages
Issue #1077
new
I’m using an environment that has both fenics and kwant. Importing either of them on their own works fine, but importing fenics before kwant causes mumps errors.
>>> import fenics
>>> import kwant
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= 1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -2
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= 1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -2
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= 1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -2
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= 1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -2
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= 1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -2
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= 1
** ERROR RETURN ** FROM ZMUMPS INFO(1)= -3
** INFO(2)= -2
The environment was created with conda create -n test fenics kwant. Here's the conda list:
# Name Version Build Channel
atomicwrites 1.3.0 py_0 conda-forge
attrs 19.1.0 py_0 conda-forge
binutils_impl_linux-64 2.31.1 h6176602_1
binutils_linux-64 2.31.1 h6176602_7
boost-cpp 1.68.0 h11c811c_1000 conda-forge
bzip2 1.0.6 h14c3975_1002 conda-forge
ca-certificates 2019.3.9 hecc5488_0 conda-forge
certifi 2019.3.9 py37_0 conda-forge
cmake 3.14.4 hf94ab9c_0 conda-forge
curl 7.64.1 hf8cf82a_0 conda-forge
cycler 0.10.0 py_1 conda-forge
dbus 1.13.6 he372182_0 conda-forge
eigen 3.3.7 h6bb024c_1000 conda-forge
expat 2.2.5 hf484d3e_1002 conda-forge
fastcache 1.1.0 py37h516909a_0 conda-forge
fenics 2019.1.0 py37_1 conda-forge
fenics-dijitso 2019.1.0 py_1 conda-forge
fenics-dolfin 2019.1.0 py37h1c4d066_1 conda-forge
fenics-ffc 2019.1.0 py_1 conda-forge
fenics-fiat 2019.1.0 py_1 conda-forge
fenics-libdolfin 2019.1.0 h370d018_1 conda-forge
fenics-ufl 2019.1.0 py_1 conda-forge
fontconfig 2.13.1 he4413a7_1000 conda-forge
freetype 2.10.0 he983fc9_0 conda-forge
gcc_impl_linux-64 7.3.0 habb00fd_1 conda-forge
gcc_linux-64 7.3.0 h553295d_7 conda-forge
gettext 0.19.8.1 hc5be6a0_1002 conda-forge
glib 2.58.3 hf63aee3_1001 conda-forge
gmp 6.1.2 hf484d3e_1000 conda-forge
gmpy2 2.0.8 py37hb20f59a_1002 conda-forge
gst-plugins-base 1.14.4 hdf3bae2_1001 conda-forge
gstreamer 1.14.4 h66beb1c_1001 conda-forge
gxx_impl_linux-64 7.3.0 hdf63c60_1 conda-forge
gxx_linux-64 7.3.0 h553295d_7 conda-forge
hdf5 1.10.4 mpi_mpich_ha7d0aea_1006 conda-forge
hypre 2.15.1 hc98498a_1001 conda-forge
icu 58.2 hf484d3e_1000 conda-forge
jpeg 9c h14c3975_1001 conda-forge
kiwisolver 1.1.0 py37hc9558a2_0 conda-forge
krb5 1.16.3 h05b26f9_1001 conda-forge
kwant 1.4.1 py37hc845acd_0 conda-forge
libblas 3.8.0 10_openblas conda-forge
libcblas 3.8.0 10_openblas conda-forge
libcurl 7.64.1 hda55be3_0 conda-forge
libedit 3.1.20170329 hf8c457e_1001 conda-forge
libffi 3.2.1 he1b5a44_1006 conda-forge
libgcc-ng 8.2.0 hdf63c60_1
libgfortran-ng 7.3.0 hdf63c60_0
libiconv 1.15 h516909a_1005 conda-forge
liblapack 3.8.0 10_openblas conda-forge
libpng 1.6.37 hed695b0_0 conda-forge
libssh2 1.8.2 h22169c7_2 conda-forge
libstdcxx-ng 8.2.0 hdf63c60_1
libuuid 2.32.1 h14c3975_1000 conda-forge
libuv 1.29.1 h516909a_0 conda-forge
libxcb 1.13 h14c3975_1002 conda-forge
libxml2 2.9.9 h13577e0_0 conda-forge
matplotlib 3.1.0 py37_0 conda-forge
matplotlib-base 3.1.0 py37h5f35d83_0 conda-forge
metis 5.1.0 hf484d3e_1003 conda-forge
more-itertools 4.3.0 py37_1000 conda-forge
mpc 1.1.0 hb20f59a_1006 conda-forge
mpfr 4.0.2 ha14ba45_0 conda-forge
mpi 1.0 mpich conda-forge
mpi4py 3.0.1 py37hf046da1_0 conda-forge
mpich 3.2.1 h1c2f66e_1008 conda-forge
mpmath 1.1.0 py_0 conda-forge
mumps-include 5.1.2 1007 conda-forge
mumps-mpi 5.1.2 h5bebb2f_1007 conda-forge
mumps-seq 5.1.2 h0ae83f2_1007 conda-forge
ncurses 6.1 hf484d3e_1002 conda-forge
numpy 1.15.4 py37h8b7e671_1002 conda-forge
openblas 0.3.6 h6e990d7_2 conda-forge
openssl 1.1.1b h14c3975_1 conda-forge
parmetis 4.0.3 hb1a587f_1002 conda-forge
pcre 8.41 hf484d3e_1003 conda-forge
petsc 3.11.1 h624fa55_1 conda-forge
petsc4py 3.11.0 py37h906564f_0 conda-forge
pip 19.1 py37_0 conda-forge
pkg-config 0.29.2 h14c3975_1005 conda-forge
pkgconfig 1.3.1 py37_1001 conda-forge
pluggy 0.11.0 py_0 conda-forge
pthread-stubs 0.4 h14c3975_1001 conda-forge
ptscotch 6.0.6 h5a4526e_1002 conda-forge
py 1.8.0 py_0 conda-forge
pybind11 2.2.4 py37h6bb024c_1000 conda-forge
pyparsing 2.4.0 py_0 conda-forge
pyqt 5.9.2 py37hcca6a23_0 conda-forge
pytest 4.5.0 py37_0 conda-forge
python 3.7.3 h5b0a415_0 conda-forge
python-dateutil 2.8.0 py_0 conda-forge
qsymm 1.1.2 py_0 conda-forge
qt 5.9.7 h52cfd70_1 conda-forge
readline 7.0 hf8c457e_1001 conda-forge
rhash 1.3.6 h14c3975_1001 conda-forge
scalapack 2.0.2 h2831592_1005 conda-forge
scipy 1.3.0 py37hab63836_0 conda-forge
scotch 6.0.6 h491eb26_1002 conda-forge
setuptools 41.0.1 py37_0 conda-forge
sip 4.19.8 py37hf484d3e_1000 conda-forge
six 1.12.0 py37_1000 conda-forge
slepc 3.11.1 h00d104f_0 conda-forge
slepc4py 3.11.0 py37hce3d510_0 conda-forge
sqlite 3.26.0 h67949de_1001 conda-forge
suitesparse 4.5.6 heab0a99_1202 conda-forge
sympy 1.4 py37_0 conda-forge
tbb 2019.6 hc9558a2_0 conda-forge
tinyarray 1.2.1 py37h637b7d7_1000 conda-forge
tk 8.6.9 h84994c4_1001 conda-forge
tornado 6.0.2 py37h516909a_0 conda-forge
wcwidth 0.1.7 py_1 conda-forge
wheel 0.33.4 py37_0 conda-forge
xorg-libxau 1.0.9 h14c3975_0 conda-forge
xorg-libxdmcp 1.1.3 h516909a_0 conda-forge
xz 5.2.4 h14c3975_1001 conda-forge
zlib 1.2.11 h14c3975_1004 conda-forge
