Subdomain error in dolfin_fine_subdomains.xml

[istorpe]

There seems to be something wrong in the marking of the boundaries in dolfin_fine_subdomains.xml on fenicsproject.org/pub/data/meshes/.

[Johan Hake]

Please provide a minimal code example showing what the problem is.

[istorpe]

The attached plot shows the problem.

[Prof Garth Wells]

You've attached a figure. Johan asked for a code example.

[istorpe]

mesh = Mesh("dolfin_fine.xml.gz")
sub_domains = MeshFunction("size_t", mesh, "dolfin_fine_subdomains.xml.gz")
plot(sub_domains)

[Johan Hake]

Indeed it looks screwed up, thanks for reporting. Next time please provide a minimal, but runnable code example, not just minimal ;) And a short instruction of where one should run the code would also help :)

[istorpe]

OK, thanks.

[Johan Hake]

This file should fix the issue. Someone with the correct knowhow and/or privileges should up load it to the server.

[istorpe]

This looks much better, but I thought the inner boundary (around the dolphin) also should be marked.

[Johan Hake]

Good catch! Here is a new one.

[istorpe]

This looks perfect, thanks!

[Johan Hake]

Issue #128 was marked as a duplicate of this issue.

[Johan Hake]

Fixed by uploading a corrected subdomain file to fenicsproject.org server