Commits

Author Commit Message Labels Comments Date
jeremy goecks
Use url_for to generate logo URL.
jeremy goecks
Add tipsy config to icon buttons and add tipsy to paramamonster.
jeremy goecks
(a) Paramamonster implemention; (b) bug fixes and small additions to style sheets; and (c) bug fixes for rerunning tools on complete datasets.
Init Hello
Added remote authentication to the toolshed.
smcmanus
Generalized exit code and regex handling. TaskWrapper now uses the newly-generalized handling, too.
Init Hello
Also added missing publicbuilds.txt
Init Hello
Added missing builds.txt for Ensembl, fixed erroneous first line in output.
Dannon Baker
Add share_string option to cloud_launch.
smcmanus
Recommit of PBS and DRMAA fixes
Daniel Blankenberg
Add name parameter to IGV external display applications.
Daniel Blankenberg
Fix for getting mime type of converted datasets when not specified explicitly for external display applications.
Greg Von Kuster
Implement support for handling refined xml definition for installing tool dependencies along with installed tool shed repositories.
Init Hello
Added Ensembl build parser. Improved genome downloader interface. Added post-download indexing feature.
Greg Von Kuster
Revert one of the "fixes" in 7301:46de10d8c8e5.
Greg Von Kuster
More tool shed refinements to enable working with Galaxy's ToolDataTableManager.
Daniel Blankenberg
Allow external display applications to work when login_required=True.
Greg Von Kuster
Refinements for installing and managing tool dependencies for tools contained in installed tool shed repositories.
Dannon Baker
Remove Availability Zone placement from cloud_launch instance kickoff. This prevents the failure where an AZ is temporarily unavailable by allowing Amazon to auto-place.
Jeremy Goecks
Finn Bacall
Included workflow SVG representation in myexperiment export
smcmanus
PBS runner now writes and reads an exit code for each command
Dannon Baker
Remove debugging exception from 06249bb8e6c9.
smcmanus
Adding in exit code management for local changes; I'm holding off on the PBS and generic DRMAA runners until they're tested.
Ross Lazarus
Can't be too careful - reverted base.css loading_indicator to tip version
Ross Lazarus
Needed a base.css change also to fix the restriction on tool form parameter widths
Ross Lazarus
Removed hard coded sizes of 40 characters from templates/form.mako to allow parameter size= settings to work correctly
Dannon Baker
S3 object store now functional.
smcmanus
Merge issues.
smcmanus
Fixing vimdiff errors.
smcmanus
Added application of regular expressions and exit code. Pulling exit
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