Using -strand with -ofiletype bgen produces malformed file

Issue #62 resolved
Gavin Band repo owner created an issue

e.g.:

$ qctool_v2.0.1 -g test.bgen -strand strand.txt -og aligned.bgen
$ bgenix -index -g aligned.bgen
!! (BGenError): an error occurred reading from the input file.

Comments (2)

  1. Log in to comment