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Issues (1–21 of 21)

Title T P Status Votes Assignee Created Updated Actions
#12: Wish: Output reference position in matrix file
enhancement minor open
#65: Filtering Results
task minor new
#63: ReadCount vs ReadCountAln
task minor new
#64: -tsv option does not produce proper tsv output
bug minor resolved
#54: Feature request: Write @PG flag in SAM output
enhancement minor resolved
#61: smallcase and caps in consensus fsa output?
enhancement minor closed
#56: *.res and *.mapstat scores
bug minor new
#55: Misinterpretation of TLEN field in SAM output
bug minor new
#43: Template N's reported as A's
bug minor new
#37: Modifying previously built index
task minor resolved
#32: KMA -Sparse hangs when run against non-Sparse database
bug minor resolved
#31: normalization for KMA results
task minor new 1
#28: Wrong template length in spa file
bug minor resolved
#27: Segfault when indexing with high k
bug minor resolved
#7: Filter SNPs in consensus sequence
enhancement minor resolved
#19: Fragment file sometimes contain 9 fields
bug minor resolved
#22: Strange bad alignments - poor default scoring scheme?
proposal minor resolved
#17: RefSeq database computational requirements
task minor new
#10: Map to best template only
enhancement minor new
#6: Example commands do not work
enhancement minor resolved
#2: Error 12
task minor closed