ResFinder Database creation

[Jeevan Karloss]

When I run resfinder it says ".length.b" file missing or not found.
Should I index the fsa files using kma? And, how to do that?

KMA does not create .fsa.length.b file only for one fsa file. Not for all.

How to proceed here?

[CGE Helpdesk]

Dear Jeevan.

Thank you for your question and interest in using ResFinder.
You should download KMA and use it to index the files. Files and instructions are here: https://bitbucket.org/genomicepidemiology/kma/src/master/

I hope this helps. If not, please write again!

Best,
Sofie, CGE Helpdesk