Unable to make database

Issue #5 resolved
Anuradha Ravi created an issue

Hello

I am trying to make the resfinder database using your very clear protocol. But I am having issues in the first step when I clone the repository to my linux machine.

It is asking for a public key to connect which I dont have and no idea where it comes from. Could you please help me with this step.

Thanks!

ubuntu@anuradhr:~$ git clone https://bitbucket.org/genomicepidemiology/resfinder.git Cloning into 'resfinder'... remote: Counting objects: 1497, done. remote: Compressing objects: 100% (1194/1194), done. remote: Total 1497 (delta 965), reused 572 (delta 296) Receiving objects: 100% (1497/1497), 32.26 MiB | 14.26 MiB/s, done. Resolving deltas: 100% (965/965), done. ubuntu@anuradhr:~$ cd ./resfinder/ ubuntu@anuradhr:~/resfinder$ ./INSTALL_DB Provide a path to or a name for the database, followed by [ENTER]: database Cloning into 'database'... The authenticity of host 'bitbucket.org (104.192.143.2)' can't be established. RSA key fingerprint is SHA256:zzXQOXSRBEiUtuE8AikJYKwbHaxvSc0ojez9YXaGp1A. Are you sure you want to continue connecting (yes/no)? yes Warning: Permanently added 'bitbucket.org,104.192.143.2' (RSA) to the list of known hosts. Permission denied (publickey). fatal: Could not read from remote repository.

Please make sure you have the correct access rights and the repository exists. Do you want to fix permissions, yes/y or no/n, followed by [ENTER]: yes enter group name followed by [ENTER]:

find: ‘database’: No such file or directory find: ‘database’: No such file or directory ubuntu@anuradhr:~/resfinder$

Comments (2)

  1. RolfKaas

    It appears the path in the readme was incorrect. I have changed it.

    Sorry about the inconvenience, can you confirm that it works now?

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