- changed status to resolved
Test error: module 'collections' has no attribute 'MutableSet'
Issue #70
resolved
Running tests
Done
Traceback (most recent call last):
File "/usr/bin/run_resfinder.py", line 8, in <module>
from cge.resfinder import ResFinder
File "/usr/share/resfinder/cge/resfinder.py", line 14, in <module>
from .output.table import TableResults
File "/usr/share/resfinder/cge/output/table.py", line 2, in <module>
from .orderedset import OrderedSet
File "/usr/share/resfinder/cge/output/orderedset.py", line 20, in <module>
class OrderedSet(collections.MutableSet):
AttributeError: module 'collections' has no attribute 'MutableSet'
EEEE
In python 3.10[1] deprecated aliases to Collections Abstract Base Classes from the collections module have been removed. These imports must be done from collections.abc.
Trivial change below:
--- a/cge/output/orderedset.py
+++ b/cge/output/orderedset.py
@@ -17,7 +17,7 @@
# SOFTWARE.
import collections
-class OrderedSet(collections.MutableSet):
+class OrderedSet(collections.abc.MutableSet):
def __init__(self, iterable=None):
self.end = end = []
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Fix Issue
#70: MutableSet is since Python 3.10 within collections.abc→ <<cset df2819998f83>>