AttributeError: module '__main__' has no attribute 'db_resfinder/'

Issue #80 resolved
NEELAM KUSHWAHA created an issue

Hi, i am trying to test resfinder installation and it give following error ? If anyone know anything about it please help me.

python3 tests/functional_tests.py -db_point DB_PATH_POINT db_pointfinder/ -db_res DB_PATH_RES db_resfinder/ -k /home/bvs/Neelam/resfinder/kma -b /usr/bin/blastn

EE

ERROR: db_pointfinder/ (unittest.loader._FailedTest)

AttributeError: module 'main' has no attribute 'db_pointfinder/'

======================================================================

ERROR: db_resfinder/ (unittest.loader._FailedTest)

AttributeError: module 'main' has no attribute 'db_resfinder/'


Ran 2 tests in 0.000s

FAILED (errors=2)

Thank you

Comments (4)

  1. CGE Helpdesk

    Hello,
    Thank you for your interest in Resfinder.

    To run the functional test you need to replace DB_PATH_POINT and DB_PATH_RES with the appropriate paths and DB_PATH_POINT and DB_PATH_RES should not be included in the command.

    It should look something like this : (depending on where you have saved the databases you may need to alter the paths)

    python3 tests/functional_tests.py -db_point /home/bvs/Neelam/resfinder/db_pointfinder/ -db_res /home/bvs/Neelam/resfinder/db_resfinder/ -k /home/bvs/Neelam/resfinder/kma -b /usr/bin/blastn

    Best regards

    Maja, CGE Helpdesk

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