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rna
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Author Commit Message Date Builds
Karthik Narasimhan
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Karthik Narasimhan
version modified for pipeline
Karthik Narasimhan
added out files and others
Karthik Narasimhan
added options for RNA params
Karthik Narasimhan
added initial RNA experiments
Karthik Narasimhan
added init for parametric case
Karthik Narasimhan
.
Karthik Narasimhan
Fixed NPB - back to working state
Karthik Narasimhan
proj structure stable - need to fix sva_npb
Karthik Narasimhan
SVA_NPB
Karthik Narasimhan
added plotting scripts
Karthik Narasimhan
paper submission version
Karthik Narasimhan
workable hyperparams
Karthik Narasimhan
NPB version 1 full
Karthik Narasimhan
added NPB versions. before global moves
Karthik Narasimhan
Before NPB code
Karthik Narasimhan
fixed em bug - now successive iters use updated jump points
Karthik Narasimhan
for KL - better than MCMC and EM (maybe?)
Karthik Narasimhan
need to add poisson and init using heuristic
Karthik Narasimhan
fixed viterbi and added self-transitions
Karthik Narasimhan
before refactoring. includes remove moves
Karthik Narasimhan
optimization v1 - without constraints