1. Genomics Virtual Lab
  2. Untitled project
  3. fastq_groomer_parallel

Overview

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Copyright (c) 2012, Kenneth Sabir
All rights reserved.

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INSTALLATION:
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Set the number of threads to use by editing: 
fastq_groomer_parallel.xml:
Modify the last argument in the <command> tag, Default is 8

Tested on galaxy-dist -r e6444e7a1685
This currently depends on the following galaxy_utils python library which should come with the default galaxy install

More info:
    from galaxy_utils.sequence.fastq import fastqReader, fastqVerboseErrorReader, fastqAggregator, fastqWriter
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