Python requirements can't build on Ubuntu 20.04
On a fresh Ubuntu 20.04 VM, building the python requirements in a virtual environment by doing
$ python3 -m venv pythonenv
$ . pythonenv/bin/activate
$ pip install -r requirements.txt
fails to build numpy
with
[pages of output]
ERROR: Command errored out with exit status 1: /home/joseph/code/gs2/pythonenv/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-6guyljiw/numpy/setup.py'"'"'; __file__='"'"'/tmp/pip-install-6guyljiw/numpy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-7uf1bh1j/install-record.txt --single-version-externally-managed --compile --install-headers /home/joseph/code/gs2/pythonenv/include/site/python3.8/numpy Check the logs for full command output.
There are only three packages in requirements.txt
,
numpy==1.16.6
netCDF4==1.5.3
ford==6.0.0
and we’ve pinned versions that worked on Ubuntu 16.04 (a very non-fresh install…).
Changing the numpy
version to the current latest numpy==1.19.1
works, as does specifying numpy>=1.16.6
. AIUI, it’s better to specify exact versions, but also, I can’t verify that 1.19.1
works on any machine except my own. What’s good practice here?
Comments (4)
-
reporter -
pip install numpy~=1.18
works in 16.04, so if it also works in 20.04 I suggest bumping to that.~=
is best practice, means “install highest compatible version”.It doesn’t look like 1.19.1 is available on 16.04, only goes up to 1.19.0rc1.
-
reporter Thanks!
~1.18
works on 20.04, since it just installs1.19.1
. I’ll make a PR. -
reporter - changed status to resolved
Resolved by PR 315
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One for @Peter Hill