Anonymous avatar Anonymous committed 07df686

Bug fixes for the ctd tool

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Files changed (2)

tools/human_genome_variation/ctd.pl

 }
 close FH or die "Couldn't close $in, $!\n";
 
-my $url = 'http://ctd.mdibl.org/tools/batchQuery.go';
-#my $url = 'http://globin.bx.psu.edu/cgi-bin/print-query';
+my $url = 'http://ctdbase.org/tools/batchQuery.go';
+#my $url = 'http://ctd.mdibl.org/tools/batchQuery.go';
 my $d = join("\n", @data);
 #list maintains order, where hash doesn't
 #order matters at ctd

tools/human_genome_variation/ctd.xml

        <when value="genes">
           <!-- do nothing -->
        </when>
-       <when value="pathways">
+       <when value="pathways_inferred">
           <!-- do nothing -->
        </when>
-       <when value="pathways_curated">
-          <!-- do nothing -->
-       </when>
-       <when value="pathways_inferred">
+       <when value="pathways_enriched">
           <!-- do nothing -->
        </when>
        <when value="diseases">
 start with '-' are a subset of a choice above them; you can chose
 either the general interaction type or a more specific one.
 
-Home page: http://ctd.mdibl.org/
+Home page: http://ctdbase.org
 
 .. _tabular: ./static/formatHelp.html#tab
 
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