# and 'hg19' for human. For more information, see the 'static library'
# Define a variable with a fastq path, which is used in [comparison]
-Data1 = for_test/micro.fastq
-Data2 = for_test/micro2.fastq
+RNAi = /mnt/Storage/home/liuj/Han_histone/prdm14/prdm14_RNAi.fastq
+control = /mnt/Storage/home/liuj/Han_histone/prdm14/prdm14_control.fastq
# Create a comparison for more analysis, such as differential genes
# "Sample1vsSample2 = sample1:sample2,sample2.rep1,sample2.rep2"
# DON'T use SPACEBAR near commas and the colon.
# Custom the usage to use tools, don't reverse the order in the list
# The dependency of tools look like this
steps = fastqc,tophat,gfold,summary_mapping,summary_rpkm
# which directory you want to use to output