haoxiong committed 5134e6a

Fixed a small bug that causes randomForest part of to have trouble.

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 	with open('pfm_scorefile.txt','w') as outf:
 		## write the header first
-		outf.write('\t'.join(motifs+['Class'])+'\n')
+		outf.write('\t'.join(motifs+['class'])+'\n')
 		## write scores positive and negative classes
 		seqs = read_fasta(fastafile)
 		res = score_sequences(seqs,motifs,pfms,pval)
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