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Daniel Blankenberg committed c63e973

Remove leading and trailing white space from around chromosome names in GenomicInterval class.

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Files changed (1)

lib/bx/intervals/io.py

         # Parse chrom/source column
         if chrom_col >= nfields:
             raise MissingFieldError( "No field for chrom_col (%d)" % chrom_col )
-        self.chrom = fields[chrom_col]
+        self.chrom = fields[chrom_col].strip()
         # Parse start column and ensure it is an integer
         if start_col >= nfields:
             raise MissingFieldError( "No field for start_col (%d)" % start_col )