multovl  1.3
Multiple overlaps of genomic regions
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Classes | Namespaces
linewriter.hh File Reference

Text-based output. Classes for writing MultiRegions to text line strings. More...

#include <string>
#include <sstream>

Go to the source code of this file.

Classes

class  multovl::io::Linewriter
 Base class of stringifier objects. More...
 
class  multovl::io::BedLinewriter
 Linewriter for BED-formatted lines. The BedLinewriter writes columns 1 to 6 of the BED format specification, (http://genome.ucsc.edu/FAQ/FAQformat.html#format1). More...
 
class  multovl::io::GffLinewriter
 Linewriter for GFF-formatted lines. The GffLinewriter class understands Versions 2 and 3 of the GFF format specification (http://www.sanger.ac.uk/resources/software/gff/spec.html). More...
 

Namespaces

 multovl
 Namespace for the MULTOVL tools.
 
 multovl::io
 Namespace for the MULTOVL input/output services.
 

Detailed Description

Text-based output. Classes for writing MultiRegions to text line strings.

Author
Andras Aszodi
Date
2011-01-23.