multovl
1.3
Multiple overlaps of genomic regions
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This is the complete list of members for multovl::MultiOverlap, including all inherited members.
add(const Region ®ion, unsigned int trackid) | multovl::MultiRegLimit | |
boost::serialization::access (defined in multovl::MultiOverlap) | multovl::MultiOverlap | friend |
find_overlaps(unsigned int ovlen, unsigned int minmult=1, unsigned int maxmult=0, bool intrack=true) | multovl::MultiOverlap | |
find_unionoverlaps(unsigned int ovlen, unsigned int minmult=2, unsigned int maxmult=0) | multovl::MultiOverlap | |
MultiOverlap() | multovl::MultiOverlap | inline |
MultiOverlap(const Region ®ion, unsigned int trackid) | multovl::MultiOverlap | inline |
MultiRegLimit() | multovl::MultiRegLimit | inline |
MultiRegLimit(const Region ®ion, unsigned int trackid) | multovl::MultiRegLimit | inline |
MultiRegLimit(const MultiRegLimit &other) | multovl::MultiRegLimit | |
multiregvec_t typedef (defined in multovl::MultiOverlap) | multovl::MultiOverlap | |
nonconst_reglim() | multovl::MultiRegLimit | inlineprotected |
operator+=(const MultiRegLimit &rhs) | multovl::MultiRegLimit | |
operator=(const MultiRegLimit &rhs) | multovl::MultiRegLimit | |
overlap_stats(Counter &counter) const | multovl::MultiOverlap | |
overlaps() const | multovl::MultiOverlap | inline |
reglim() const | multovl::MultiRegLimit | inline |
reglim_t typedef (defined in multovl::MultiRegLimit) | multovl::MultiRegLimit | |
~MultiRegLimit() (defined in multovl::MultiRegLimit) | multovl::MultiRegLimit | inlinevirtual |