multovl  1.3
Multiple overlaps of genomic regions
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src Directory Reference

Directories

directory  file
 
directory  test
 

Files

file  ancregion.hh [code]
 Ancestor regions representing the regions giving rise to overlaps.
 
file  basepipeline.hh [code]
 
file  errors.hh [code]
 
file  multioverlap.hh [code]
 Multiple genomic region overlaps.
 
file  multiregion.hh [code]
 Region representing multiple overlaps for file-based "multovl".
 
file  multireglimit.hh [code]
 Collection of multiple region limits.
 
file  multovlopts.hh [code]
 
file  pipeline.hh [code]
 
file  polite.hh [code]
 Wrapper around the overengineered boost::program_options.
 
file  region.hh [code]
 Genomic regions with coordinates and a name.
 
file  reglimit.hh [code]
 Helper class to keep track of the limits (first, last position) of regions to be overlapped.
 
file  timer.hh [code]