35 #ifndef MULTOVL_CLASSIC_PIPELINE_HEADER
36 #define MULTOVL_CLASSIC_PIPELINE_HEADER
42 #include "pipeline.hh"
43 #include "classicopts.hh"
91 unsigned int read_tracks();
93 bool write_gff_output();
94 bool write_bed_output();
95 void write_comments();
100 #endif // MULTOVL_CLASSIC_PIPELINE_HEADER
MultovlOptbase * opt_pimpl()
Definition: basepipeline.hh:132
Abstract class that provides a framework for detecting multiple overlaps using the MultiOverlap class...
Definition: pipeline.hh:57
Definition: classicpipeline.hh:53
virtual ClassicOpts * opt_ptr()
Definition: classicpipeline.hh:87
virtual unsigned int read_input()
virtual bool write_output()
ClassicPipeline(int argc, char *argv[])
Option handling for the file-based multovl tools.
Definition: classicopts.hh:56