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PROTEOMICS
======
This repository contains some small modifications to its parent (galaxy-dist) which provide support for Proteomics data types and display applications. You can install and setup galaxy-proteomics just as for normal galaxy.  To use the galaxy tools you will need to install them and their dependencies.

The proteomics tools are currently available at;

https://bitbucket.org/iracooke/protk-toolshed

It is hoped that these will be available entirely via the galaxy toolshed.

GALAXY
======
http://galaxyproject.org/

The latest information about Galaxy is always available via the Galaxy
website above.

HOW TO START
============
Galaxy requires Python 2.5, 2.6 or 2.7. To check your python version, run:

% python -V
Python 2.4.4

Start Galaxy:

% sh run.sh

Once Galaxy completes startup, you should be able to view Galaxy in your
browser at:

http://localhost:8080

You may wish to make changes from the default configuration.  This can be done
in the universe_wsgi.ini file.  Tools are configured in tool_conf.xml.  Details
on adding tools can be found on the Galaxy website (linked above).

Not all dependencies are included for the tools provided in the sample
tool_conf.xml.  A full list of external dependencies is available at:

http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Dependencies

Recent activity

Greg Von Kuster

Commits by Greg Von Kuster were pushed to iracooke/galaxy-proteomics

84baec1 - Correctly handle ToolPanelSection objects when presenting the tool panel sectin redio buttons for selecting a section to contain tools installed with a tool shed repostory ...
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