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Anonymous committed 83b6d15

bnMapper documentation

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  • Tags bnMapper freeze

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File scripts/bnMapper.py

 
 """Map features from the target species to the query species of a chain alignment file.
 This is intended for mapping relatively short features such as Chip-Seq
-peaks on TF binding events. Features that get mapped on different chromosomes
-or that span multiple chains are silently filtered out. TODO:
+peaks on TF binding events. Features that when mapped
+span multiple chains or multiple chromosomes are silently filtered out. TODO:
 (1)for narrowPeak input, map the predicted peak position.
 """