maf block joiner script?

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Issue #36 resolved
shaohua created an issue

Hi, James,

Could you please tell me that which script that I should use to concatenate the adjacent blocks in a MAF file? I have tried it in the Galaxy, but not sure how to perform it by using command line interface by using the bx-python package.

Thanks a lot!

Shaohua

Comments (1)

  1. James Taylor repo owner

    Have a look at maf_tile.py and maf_tile_2.py, although they are not exactly the same as what is in Galaxy, which I believe outputs FASTA.

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