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-Indexing MAF files that have been compressed: [[Examples/Bzip2WithIndexedMAFs]]
+Indexing MAF files that have been compressed: [[Examples/Bzip2WithIndexedMAFs]]
+
+A [[http://bcbio.wordpress.com/2009/04/29/finding-and-displaying-short-reads-clustered-in-the-genome/|nice example]] of using the ClusterTree by Brad Chapman
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