Commits

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Author Commit Message Labels Comments Date
Johannes Köster
Fixes.
Branches
rules_with_dynamic_input_and_output
Johannes Köster
Finished subworkflow support.
Johannes Köster
Parsing subworkflows.
Johannes Köster
Fix success logic.
Johannes Köster
Propotype finished.
Johannes Köster
Allow to set metadata in report.
Johannes Köster
Minor.
Johannes Köster
Improved flagging support. temp, protected and dynamic can now be
Johannes Köster
Removed ruledag as it turned out to be not beneficial for some cases,
Johannes Köster
Merge branch 'master' of bitbucket.org:johanneskoester/snakemake
Johannes Köster
Show the output and a proper error when the jobscript fails.
Johannes Köster
Minor.
Johannes Köster
Initial import of nodeps functionality.
Johannes Köster
Do not look at file sizes in scheduling during immediate-submit-mode.
Johannes Köster
Use inspect to get path of entry point.
Johannes Köster
Revert way to retrieve snakemakepath to old behaviour.
Johannes Köster
Report jobid in jobscript. Mention jobid and path to jobscript in
Johannes Köster
Naming of cluster jobs.
Johannes Köster
Version bump.
Johannes Köster
Added jobscript to setup.py, changed jobscript name to not start with jobid in order to be compatible to SGE.
Johannes Köster
Minor.
Johannes Köster
Record failed jobs in scheduler.
Johannes Köster
Remove job from running record in case of error. This should fix some hangups in combination with -k.
Johannes Köster
Minor.
Johannes Köster
Cleanup of command args.
Johannes Köster
Migrate script to entry point method and setuptools in order to allow for better windows compatibility.
Johannes Köster
Enable the printing of tracebacks.
Johannes Köster
Close fds only on non-windows systems.
Johannes Köster
Properly raise a SyntaxError if multiple shell keywords appear in one rule.
Johannes Köster
Removed profile statement.
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