# Overview

Atlassian Sourcetree is a free Git and Mercurial client for Windows.

Atlassian Sourcetree is a free Git and Mercurial client for Mac.

# Curve - A waveform manipulation and analysis library for Python

Juan Pablo Caram (c) 2018

## Introduction

The Curve class represents Y values that evolve as a function of X.

Example:

import numpy as np from matplotlib.pyplot import * from curve import Curve x = np.linspace(0, 10) y = np.sin(x) mycurve = Curve(x, y) mycurve.plot()

The class provides several operations for the data within the class:

Example:

sq_curve = mycurve**2 int_curve = sq_curve.integrate().plot()

It is also possible to carry out operations between Curve's even is their

x-axis values don't match:

x1 = np.linspace(0, 10, num=30) x2 = np.linspace(0, 10, num=100) y1 = np.sin(x1) y2 = np.cos(x2) sum_curve = Curve(x1, y1) + Curve(x2, y2) sum_curve.plot()

# Curve API

## Curve(data, y=None, dtype=float)

Initilizes the Curve object with data. Usage: mycurve = Curve(x, y) or mycurve = Curve([x, y]) :param data: A 2xn (or nx2) list or Numpy array, or a 1-d vector for the x-axis values (In this case, must also provide the y parameter). :param y: 1-d vector of y-axis values correspondind to the x-axis values provided in the data parameter. If this is not provided it assumes that data contains both x and y-axis data in a 2-times-n data structure. :param dtype: Type in which the data is stored.

## Addition: curve + other

`other`

may be a scalar or a Curve.

## Multiplication: curve * other

`other`

may be a scalar or a Curve.

x1 = np.linspace(0, 10, num=130) x2 = np.linspace(0, 10, num=100) y1 = np.sin(x1) y2 = np.cos(x2 * 3) c1 = Curve(x1, y1) c2 = Curve(x2, y2) c1.plot(label='c1') c2.plot(label='c2') (c1 * c2).plot(label='c1*c2') legend();

## Division: curve / other

`other`

may be a scalar or a Curve. Reverse division, i.e., `other / curve`

, when other is a scalar is also supported.

c1.plot(label='c1') c2.plot(label='c2') (c1 / c2).plot(label='c1/c2') legend();

## Power: curve ** other

Only scalar values of `other`

are supported at this time.

## Negative: -curve

Inverts the sign of the y-axis values.

## curve.x

X-axis values

## curve.y

Y-axis values

## curve.duration

The difference between the first and last X-axis values.

## curve.check(fix=0)

Check for proper data (Monotonicity of the x-axis values). Fix it if necessary by sorting (x, y) pairs by x. :param fix: Fix non-monotonicity in the x-axis by sorting (x, y) pairs by x. Default is False.

## curve.at(value, interpolate=True)

Returns y(x=value), interpolating values (trapezoid), otherwise returns y for the closest existing x < value. If values is a list, returns a list of corresponding values of y. :param value: X-axis value(s) for which the Y-axis value(s) is(are) returned. May be a list/Numpy array of values or a scalar (float/int). :param interpolate: Wheather to interpolate between closest X values, or to approximate to the nearest available. Default is True. :return: Corresponding Y-axis value(s).

curve = Curve([0, 3], [1, 9]) x = [1.5, 2.5] y = curve.at(x) plot(curve.x, curve.y, 'o-', label='curve') plot(x, y, 'o', label='interpolation') legend();

## curve.resample(max_grow=10)

Resamples the curve at uniform intervals. It chooses the minumum existing spacing between x-axis values as the sampling period unless the resulting number of samples is greater than max_grow times the current number of samples. In such case, the period is set to be such that the resulting number of samples is exactly max_grow times the current number of samples. :param max_grow: Maximum allowed increase in number of data points. :return: Resulting resampled curve.

## curve.envelope()

Calculates the envelope of the curve. Uses the hilbert function from scipy.signal. :return: Envelope curve.

x = np.linspace(0, 100, num=200) y = np.sin(x/10) * np.sin(x) curve = Curve(x, y) env = curve.envelope() curve.plot(label='curve') env.plot(label='envelope') legend();

## curve.envelope2(tc=None, numpoints=101)

Calculates the envelope of the curve. Slices the curve into uniform intervals and computes the maximum of the interval to determine the envelope. :param tc: Interval width for computing the maximum as the envelope. If not provided, tc = duration / (numpoints - 1). :param numpoints: Used if tc is not provided to calaculate tc. :return: Envelope curve.

x = np.linspace(0, 100, num=200) y = np.sin(x/10) * np.sin(x) curve = Curve(x, y) env = curve.envelope2(tc=5.0) curve.plot(label='curve') env.plot(label='envelope') legend();

## curve.diff()

Computes the difference (derivative) of this curve. :return: A Curve containing the derivative of this curve.

x = np.linspace(0, 10) y = np.sin(x) curve = Curve(x, y) curve_diff = curve.diff() curve.plot(label='curve') curve_diff.plot(label='d(curve)/dx') legend();

## curve.interval(xmin=None, xmax=None, include_edges=True, interpolate=True)

Extracts a segment of the curve for xmin < x < xmax. If xmin or xmax are not specified, they are considered the min(x) or max(x) respectively. :param xmin: Minimum x-axis value of the interval. :param xmax: Maximum x-axis value of the interval. :param include_edges: If xmin or xmax exceed the limits of the curve, whether to include these limits or truncate at the actual limits of the curve. Default is True. :param interpolate: If include_edge is True, whether to interpolate to compute the extremes. Default is True. :return: Curve for the specified interval.

## curve.integrate()

Generates a new Curve with the integral (trapezoidal) of this Curve. :return: A Curve containing the integral of this curve.

x = np.linspace(0, 10) y = np.sin(x) curve = Curve(x, y) curve_integ = curve.integrate() curve.plot(label='curve') curve_integ.plot(label='integ(curve)') legend();

## curve.average()

Computes a curve whose value at any given x, are the average of the y-axis values for all previous values of x. :return: Curve with the average of this Curve throughout x.

x = np.linspace(0, 30, num=200) y = np.sin(x) curve = Curve(x, y) curve.plot(label='curve') curve.average().plot(label='average') legend();

## curve.cross(edge=None)

Computes the times (or x-axis values) at which this curve crosses 0 (in y-axis values). To compute the crossing of a different threshold, shift the curve first: mycurve = Curve(x, y) cross_times = (mycurve - threshold).cross() :param edge: Whether to get just rising or falling edges. Possible values are 'rise', 'fall' or None (default). If None, it computes both rising and falling edges. :param which: Not implemented. :return: 1-d Numpy array of values corresponding to when/where along the x-axis, the y-axis values cross 0.

x = np.linspace(0, 30, num=200) y = np.sin(x) curve = Curve(x, y) curve.plot(label='curve') zero_cross = curve.cross(edge='fall') plot(zero_cross, [0]*len(zero_cross), 'o', label='pos-neg 0 crossing') legend(loc='lower left');

## curve.period(threshold=None, verbose=False)

Computes a curve with the period of this curve. The period is defined as the time between rising edges crossing the specified threshold. If not provided, it is set to the curve's average. Values are defined at the time of the threshold crossing and are with respect to the previous threshold crossing. :param verbose: If true, prints debug information. :param threshold: Value of the curve at which it is considered to have completed/started a period. :return: Period Curve.

fig, ax = subplots(2, 1) x = np.linspace(0, 30, num=500) yp = 0.5 * np.sin(x/5) y = np.sin((3+yp)*x) curve = Curve(x, y) curve.plot(ax=ax[0], label='curve') ax[0].legend() period = curve.period() period.plot(ax=ax[1], color='orange', marker='o', label='period') ax[1].legend();

## curve.frequency(threshold=None, verbose=False)

Computes the frequency of the signal/curve. This is computed as 1/period. See Curve.period(). :param threshold: Threshold used for computing the period of each cycle. :param verbose: Print out additional information. :return: Curve containing the frequency of this curve as a function of X.

fig, ax = subplots(2, 1) x = np.linspace(0, 30, num=500) yp = 0.5 * np.sin(x/5) y = np.sin((3+yp)*x) curve = Curve(x, y) curve.plot(ax=ax[0], label='curve') ax[0].legend() freq = curve.frequency() freq.plot(ax=ax[1], color='orange', marker='o', label='frequency') ax[1].legend();

## curve.plot()

Plots the curve using matplotlib.pyplot.plot(). :param ax: If provided, plots on the given axes. Otherwise, uses the current axes. :param xscale: Multiplier for x-axis values. :param yscale: Multiplier for y-axis values. :param kwargs: Additional keyword arguments passed to matplotlib.pyplot.plot().