Bitbucket is a code hosting site with unlimited public and private repositories. We're also free for small teams!

Close
Python tools for evaluating MathML expressions. Includes "Names on Nodes" functionality for evaluating phylogenetic definitions.

Recent activity

keesey

Commits by keesey were pushed to keesey/pymathema

6fefb97 - Added logic to minimize length of node-based definitions, by using branch-modification when it makes the definition shorter.
keesey

Commits by keesey were pushed to keesey/pymathema

8f26c77 - Added functionality for recording the extant set. Node-based definitions now default to branch-modified node-based if there is only one immediate subtaxon.
keesey

Commits by keesey were pushed to keesey/pymathema

fa4541f - Added ability to specify definitional author in Dephyne.
keesey

Commits by keesey were pushed to keesey/pymathema

4993631 - Changed it back to autodef, updated documentation.
keesey

Commits by keesey were pushed to keesey/pymathema

4e638a2 - Changed dephyne to use URIs instead of Namebank IDs. ITIS -> Dephyne -> MathML works.
Tip: Filter by directory path e.g. /media app.js to search for public/media/app.js.
Tip: Use camelCasing e.g. ProjME to search for ProjectModifiedEvent.java.
Tip: Filter by extension type e.g. /repo .js to search for all .js files in the /repo directory.
Tip: Separate your search with spaces e.g. /ssh pom.xml to search for src/ssh/pom.xml.
Tip: Use ↑ and ↓ arrow keys to navigate and return to view the file.
Tip: You can also navigate files with Ctrl+j (next) and Ctrl+k (previous) and view the file with Ctrl+o.
Tip: You can also navigate files with Alt+j (next) and Alt+k (previous) and view the file with Alt+o.