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kristian kvilekval upload error.

Created by kristian kvilekval
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21:17:20,767 INFO  [bq.root] [kgk] POST http://loup.ece.ucsb.edu:8888/import/transfer_8744tph9dr2
21:17:20,767 DEBUG [bq.root] HEADERS: http://loup.ece.ucsb.edu:8888/import/transfer_8744tph9dr2 {'Origin': 'http://loup.ece.ucsb.edu:8888', 'Accept-Language': 'en-US,en;q=0.9', 'Accept-Encoding': 'gzip, deflate', 'Host': 'loup.ece.ucsb.edu:8888', 'Accept': '*/*', 'User-Agent': 'Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/62.0.3202.94 Safari/537.36', 'Connection': 'keep-alive', 'Cookie': 'webflash=%7B%22status%22%3A%20%22ok%22%2C%20%22message%22%3A%20%22Welcome%20back%2C%20admin%21%22%7D; auth_tkt="8a1b6f6a4716285fbbd759c34367e42a5a153a3ekgk!userid_type:unicode"; _ga=GA1.2.58134219.1507091638; _gid=GA1.2.750801771.1511838119', 'Referer': 'http://loup.ece.ucsb.edu:8888/client_service/browser?resource=/data_service/image', 'Content-Type': 'multipart/form-data; boundary=----WebKitFormBoundaryRj3Zb4L1ynewDmU3; charset=utf-8'}
21:17:20,768 DEBUG [bq.root] PATH /import/transfer_8744tph9dr2 in DIR /home/kgk/work/bisque/bisque-packager/bq059
21:17:20,768 DEBUG [bq.import_service] import_default ('transfer_8744tph9dr2',) {'file_resource': u'<resource name="/s3/bozo/17.czi"/>', 'file': NoCopyFieldStorage('file', u'17.czi')}
21:17:20,768 DEBUG [bq.import_service] INITIAL TRANSFER {'file_resource': u'<resource name="/s3/bozo/17.czi"/>', 'file': NoCopyFieldStorage('file', u'17.czi')}
21:17:20,768 DEBUG [bq.import_service] transfers {'file_resource': u'<resource name="/s3/bozo/17.czi"/>'} 
21:17:20,768 DEBUG [bq.import_service] found file _resource/_tags <resource name="/s3/bozo/17.czi"/> 
21:17:20,768 DEBUG [bq.import_service] reading XML <resource name="/s3/bozo/17.czi"/>
21:17:20,769 DEBUG [bq.import_service] TRANSFERRED 17.czi <resource name="/s3/bozo/17.czi"/>
21:17:20,769 DEBUG [bq.import_service] TRANSFER after files {}
21:17:20,769 DEBUG [bq.import_service] TRANSFER after resources {}
21:17:20,769 DEBUG [bq.import_service] ingesting files [u'17.czi']
21:17:20,769 INFO  [bq.import_service] processing UploadFile([None] [17.czi] [<resource name="/s3/bozo/17.czi"/>] [<open file '<fdopen>', mode 'w+b' at 0x7f0ff40e1c90>] [/s3/bozo/17.czi])
21:17:20,769 DEBUG [bq.import_service] Resource type: resource
21:17:20,770 DEBUG [bq.import_service] Guessing the mime type for: 17.czi
21:17:20,770 DEBUG [bq.import_service] mime: image/series
21:17:20,770 DEBUG [bq.import_service] process uf: UploadFile([None] [17.czi] [<resource name="/s3/bozo/17.czi"/>] [<open file '<fdopen>', mode 'w+b' at 0x7f0ff40e1c90>] [/s3/bozo/17.czi])
21:17:20,770 DEBUG [bq.import_service] process, file object has no local path: [<open file '<fdopen>', mode 'w+b' at 0x7f0ff40e1c90>], move local
21:17:20,770 DEBUG [bq.identity] fetch BQUser  by name
21:17:20,773 DEBUG [bq.identity] user kgk -> 00-ZdifQ5Ew5J2pexz6xcQea9
21:17:20,774 DEBUG [bq.import_service] process filename: <fdopen>
21:17:20,774 DEBUG [bq.image_service.converter_openslide] Supported for: <fdopen>
21:17:20,774 DEBUG [bq.image_service.converter_imgcnv] Info for: <fdopen>
21:17:20,774 DEBUG [bq.image_service.converter_imaris] Info for: <fdopen>
21:17:20,774 DEBUG [bq.image_service.converter_imaris] Meta for: <fdopen>
21:17:20,774 DEBUG [bq.util.locks] worker 7 (<fdopen>,None): acquire0 thread-r
21:17:20,775 DEBUG [bq.util.locks] worker 7 (<fdopen>,None): acquired thread-r
21:17:20,775 DEBUG [bq.util.locks] worker 7 (<fdopen>,None): ->RL
21:17:20,775 ERROR [bq.import_service] During transfer: {'file_resource': u'<resource name="/s3/bozo/17.czi"/>', 'file': NoCopyFieldStorage('file', u'17.czi')}
Traceback (most recent call last):
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/import_service/controllers/import_service.py", line 1238, in transfer
    return self.transfer_internal(**kw)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/import_service/controllers/import_service.py", line 1424, in transfer_internal
    response = self.ingest(files)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/import_service/controllers/import_service.py", line 1156, in ingest
    x = self.process(f)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/import_service/controllers/import_service.py", line 1129, in process
    info = image_service.get_info(filename)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/image_service/api.py", line 285, in get_info
    return server.get_info(filename)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/image_service/controllers/service.py", line 179, in get_info
    return ImageServer.converters.info(filename)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/image_service/controllers/converter_dict.py", line 64, in info
    info = c.info(token)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/image_service/controllers/converters/converter_imaris.py", line 410, in info
    rd = cls.meta(token, **kw)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/image_service/controllers/converters/converter_imaris.py", line 199, in meta
    meta = cls.run_read(ifnm, command)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqserver/bq/image_service/controllers/converter_base.py", line 195, in run_read
    with Locks(ifnm):
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqcore/bq/util/locks.py", line 139, in __enter__
    self.acquire(self.ifnm, self.ofnm)
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqcore/bq/util/locks.py", line 63, in acquire
    self.rf = XFile.XFile(ifnm, 'rb')
  File "/home/kgk/work/bisque/bisque-packager/bq059/bqcore/bq/util/XFile.py", line 100, in __init__
    file.__init__(self, str_Filename, str_Mode, num_BufferSize)
IOError: [Errno 2] No such file or directory: '<fdopen>'

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