Can not finish loading mixOmics（library(mixOmics)）

[snmrna]

Hi, I have successfully installed mixOmics, but when I tried to load mixOmics using library(mixOmics), it showed: loading MASS loading lattice loading gplot2

But STOP here, anyone know how to fix this problem? I used R 3.5.0 on a mac (Platform: x86_64-apple-darwin15.6.0 (64-bit)) Thanks in advance! Bin

[Florian Rohart]

Hi there,

We observed that before and it was due to another package that failed to load properly. I would suggest to load each of the following and see which one is not loading:

library(MASS)
library(lattice)
library(ggplot2)
library(igraph)
library(rgl)
library(ellipse)
library(corpcor)
library(RColorBrewer)
library(parallel)
library(dplyr)
library(tidyr)
library(reshape2)
library(methods)
library(matrixStats)
library(rARPACK)
library(gridExtra)

From memory 'rgl' will not load

[snmrna]

Thanks for your suggestion! In my case, it is 'rgl' not load, do you know how to fix this problem? regards, Bin

[Florian Rohart]

I would suggest first to try to reinstall rgl, and maybe second to try to install XQuartz (application that is used to plot in R) https://www.xquartz.org/

[snmrna]

Thank you very much! I successfully loaded mixOmics after reinstall XQuartz!😆