immediate methods improvements
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selectVar with multiblock method: variables are not sorted. OK in devel
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cndition on ncomp in multiblock methods should be mode = 'numeric', not 'double' OK in devel
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selectVar: need to put A block per default, otherwise gives an error. ok should now work to be tested?
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KA to fix selectVar.Rd (problem with outcome name name is name.X etc.)
Comments (4)
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reporter - selectVar: need to put A block per default, otherwise gives an error.
- If you run selectVar(object, comp = 1) without specifying block then throws error. Could we put a block per default maybe? Or throw a warning? Or outputting all blobkcs when not specified? selectVar(object, comp = 1, block = 1)
- KA to fix selectVar.Rd (problem with outcome name name is name.X etc.)
- Inconsistency with regards to Values in .Rd
Regards,
Kim-Anh
Too brief? Apologies, I need to restrain my typing due to a computer elbow injury.
--
Dr. Kim-Anh Lê Cao
NHMRC Career Development Fellow
ResTeach Affiliate (School of Chemistry and Molecular Biosciences)
The University of Queensland Diamantina Institute
Translational Research Institute
Level 5, 37 Kent Street | Woolloongabba QLD 4102
T: +61 (0)7 3443 7069| F: +61 (0)7 3443 6966
http://www.tri.edu.au/staff/kim-anh-le-cao
mixOmics: http://mixomics.org/
- selectVar: need to put A block per default, otherwise gives an error.
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reporter - edited description
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- changed status to resolved
selectVar(object,comp=1) now shows outputs for all blocks, as of mixOmics 6.0.0
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#103The variables were not sorted in selectVar.sgcca because the scripts was very buggy. Especially because the output of a sgcca object is 'blocks' and not 'data'. Scripts now tested on the example from the selectVar.Rd and gives good results as expected
I don't understand these issues. Please clarify