- changed status to open
Trim not working for amino acid sequences
Issue #109
resolved
Hi,
When using the aminoAcidProperties() function, I noticed that the trim option is not used when setting nt = FALSE, only if nt = TRUE will it be considered. I don’t know if this is by design, but from reading the documentation of the trim option, it sounds like this is by mistake:
trim
if TRUE
remove the first and last codon/amino acids from each sequence before calculating properties. If FALSE
do not modify input sequences.
See line 545 and line 546 in the AminoAcids.R file on Github for reference.
Thank you.
Comments (2)
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- changed status to resolved
Thanks for reporting. Fixed in 6bfb6d9.
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