- edited description
error and warning messages from plotDiversityCurve()
Issue #70
resolved
Reproducible example (with v0.2.10)
div <- rarefyDiversity(ExampleDb, "SAMPLE", nboot=100)
# Plot diversity
plotDiversityCurve(div, legend_title="Sample", log_x=T, log_y=T)
**Error in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y, : polygon edge not found
In addition: Warning messages:
1: Transformation introduced infinite values in continuous x-axis
2: Transformation introduced infinite values in continuous x-axis**
Fine with log_x=F, log_y=F
Comments (3)
-
reporter -
reporter I think it's because the default of
min_q
inrarefyDiversity
is 0, sodiv@data$Q
contains 0, which, when taking the log, gives-Inf
. -
reporter - changed status to resolved
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