Count genes once per clone, or count one gene per clone?

Issue #71 new
Susanna Marquez
created an issue

The documentation for countGenes is ambiguous. It says count genes once per clone, but describes the use one gene per clone to do the counting, which is what the code actually does (gene can be gene, familiy, allele, asis). https://bitbucket.org/kleinstein/alakazam/src/0cd5a7dc0934b180f6e5d480a4878369ec2d4d4d/R/Gene.R#lines-101:114 Check vignette too.

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