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  2. B Cell Repertoires
  3. alakazam

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Issues (26–50 of 108)

Title T P Status Votes Assignee Milestone Created Updated Actions
#19: Incorporate prototype-topology package
enhancement major resolved
#44: countGenes. Error when using the clone argument with data from the older ExampleDb.gz
bug major resolved
#40: Example column names
bug major resolved
#11: Need to validate the significance tests in testDiversity
task major new
#41: Alakazam with older R version
proposal major resolved
#36: Won't build on R < 3.2.0
bug major resolved
#30: For aminoAcidProperties and related fx: test NAs
enhancement major resolved
#35: Changes required for CRAN resubmission
bug major resolved
#32: R CMD check NOTES:
bug major resolved
#22: Gravy error from R CMD Check
bug major resolved
#26: translateDNA should take a vector
enhancement major resolved
#27: countPattern should take a vector
enhancement major resolved
#14: Updated package to use dplyr
enhancement major resolved
#25: Add coverage curves
enhancement major new
#12: Add amino acid properties functions
enhancement major resolved
#3: testDiversity generates one-sided p-values and it should be two-sided
bug major resolved
#103: groupGenes needs updated naming and to figure out the locus list.
bug minor resolved
#105: ylim argument in plotAbundanceCurve has no effect
bug minor resolved
#95: calcJunctionAlignment needs an example
task minor resolved
#91: basic, acidic and aromatic output fields from aminoAcidProperties() are always zero
bug minor resolved
#92: Add readAIRR() and update readChangeoDb(). They should accept a vector of files and check uniqueness
proposal minor new 1
#86: Execution halted for geneCounts() on c_call
enhancement minor resolved
#90: NA row for geneCounts() on d_call
bug minor resolved
#89: getSegment doesn't work for C-regions
bug minor resolved
#88: Clarify file I/O documentation
enhancement minor resolved
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