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Issues

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Issues (1–25 of 40)

Title T P Status Votes Assignee Milestone Created Updated Actions
#70: error and warning messages from plotDiversityCurve()
bug minor resolved
#62: collapseDuplicates
bug major resolved
#46: Reduce example run times
bug major wontfix
#36: Won't build on R < 3.2.0
bug major resolved
#35: Changes required for CRAN resubmission
bug major resolved
#32: R CMD check NOTES:
bug major resolved
#13: Cannot knit lineage vignette pdf
bug minor resolved
#15: Add support for "TRGVA*01" allele
bug trivial resolved
#9: Outstanding `R CMD check` warnings
bug minor resolved
#3: testDiversity generates one-sided p-values and it should be two-sided
bug major resolved
#2: distToNearest model names differ from Change-O names
bug trivial resolved
#69: Allow ungrouped data in rarefyDiversity and estimateAbundance
enhancement minor resolved
#64: Make length mismatch warning more meaningful in makeChangeoClone
enhancement minor resolved
#53: Add clone count test to countGenes unit tests
enhancement minor resolved
#28: Add CDR3 and FRW4 to extractVRegion
enhancement minor wontfix
#34: More diversity plots
enhancement minor resolved
#61: See if there is way to add dispatching to plotAbundance
enhancement minor resolved
#55: Add publication reference to Description field for v0.2.9
enhancement trivial resolved
#16: Add annotation collapse without duplicate removal to collapseDuplicates
enhancement minor resolved
#37: Conversion to stringi
enhancement minor wontfix
#48: Add saturation curves
enhancement major new
#19: Incorporate prototype-topology package
enhancement major resolved
#38: Add tigger gene ordering function
enhancement minor resolved
#43: Add clone subsetting to countGenes
enhancement minor resolved
#39: Consider having readChangeoDb wrap fread() instead of read.table()
enhancement minor resolved
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