INDEL in J sequense

[Eadit Bernstein]

After using 'MakeDB', I have sequences with indels in J sequence but INDELS=FALSE in the table, for example: SEQUENCE_INPUT= "GATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTANCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTNCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTTGGACACCATACGACCGGGATTCGGGGAAAAGAGCCTACTACTATCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCC"

J_CALL="IGHJ6*02" insertion in position 14

[Jason Vander Heiden]

Thanks, Eadit. Can you send us a set of input files (fasta and imgt) so we can test this?

[Jason Vander Heiden]

No news is good news.