INDEL in J sequense
Issue #71
resolved
After using 'MakeDB', I have sequences with indels in J sequence but INDELS=FALSE in the table, for example: SEQUENCE_INPUT= "GATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTANCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTNCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTTGGACACCATACGACCGGGATTCGGGGAAAAGAGCCTACTACTATCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCC"
J_CALL="IGHJ6*02" insertion in position 14
Comments (2)
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- changed status to resolved
No news is good news.
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Thanks, Eadit. Can you send us a set of input files (fasta and imgt) so we can test this?