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  2. B Cell Repertoires
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Issues (1–25 of 112)

Title T P Status Votes Assignee Milestone Created Updated Actions
#112: Findling novel allele using TIgER
task major resolved
#111: how to find shared clonotypes among individuals
task major closed
#110: Error while inferring genotype with TigGER
task major closed 1
#109: Change-O utility script expects wget2, but wget2 not in container
bug major resolved
#108: NCBI URLs are outdated
bug minor resolved
#98: Decide a standard name to specify the locus values to analyze
task major resolved
#104: light_cluster.py needs better error message when there is no cell_id overlap between H and L.
task minor wontfix
#106: Changeo-10x function may output wrong results
bug major resolved
#101: Website and tutorials
enhancement major resolved
#100: Conversion of tutorials from Jupyter Notebooks to R Markdown
training
task minor resolved
#102: Merge the 10x tutorial with the dowser tutorial
task major resolved
#105: Error when adding geom_tiplab() to trees
bug major resolved
#107: fetch_imgtdb.sh seems not work
bug major resolved
#103: Update AbSeq primer sets
enhancement minor resolved
#99: Missing TIgGER from Immcantation Portal Image & Link
bug major resolved
#96: usearch/vsearch version clash with AssemblePairs.py
documentation
task major new
#78: Update copyright to 2021
task minor open
#97: Remove organism name checks in docker script run_igblast.sh
bug major resolved
#71: improve documentation for data sharing local/container
enhancement major resolved
#88: Figures missing/misplaced in the readthedocs version of the intro lab notebook
bug minor resolved
#92: allow user to set RAM
enhancement major resolved
#95: too-large trees have node labels not properly shown
enhancement major resolved
#91: Immcantation 4.4.0
task major closed
#94: error in 'getTrees' function of dowser package
bug major new
#93: error in 'createGermlines' function
bug minor new
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